Computational Biology

Recommended Readings: David C. Page, M.D. Friday September 11, 2020

By |2020-09-10T19:14:58+00:00August 26th, 2020|Categories: Biology, Computational Biology, Development, Evolutionary Biology, Evolutionary Genetics, Friday Lecture Series via Zoom webinars, Genomics, Recommended Readings|Tags: , , , |

  Webinar Friday Lecture Series  (open to the Tri-I community) Friday, September 11, 2020 David C. Page, M.D. Professor Department of Biology Massachusetts Institute of Technology Males and Females as Products of Alternative, Dynamic Readings of the Genome Recommended Readings: Empirical Articles Godfrey AK, et al. (2020) Quantitative analysis of Y-chromosome gene expression in 36 [...]

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Recommended Readings: Michael Nachman, Ph.D. Friday May 15, 2020

By |2020-05-12T14:37:40+00:00May 6th, 2020|Categories: Computational Biology, Ecology and Environmental, Environmental Science, Evolutionary Genetics, Friday Lectures, Genomics, Molecular Biology, Recommended Readings|Tags: , , , |

                                                          Webinar Friday Lecture Series (only open to the Rockefeller University community) Friday, May 15, 2020 Michael Nachman, Ph.D. Professor Department of Integrative Biology University of California The Genomic Basis of Environmental Adaptation in House Mice   Recommended Readings: Empirical Articles Bittner, Noelle K.J.; Mack, Katya L.; Nachman, Michael W. (2020). Plasticity in gene expression [...]

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Recommended Readings: Shixin Liu Ph.D., Monday March 16, 2020

By |2020-03-03T15:09:51+00:00March 3rd, 2020|Categories: Biophysics, Chemical Biology, Computational Biology, Genetics, Genomics, Monday Lectures, Physics, Recommended Readings, Structural Biology, Uncategorized|Tags: , , , , |

Monday Lectures     Monday, March 16, 2020 4:00 p.m. Carson Family Auditorium Shixin Liu   Ph.D. Assistant Professor and Head The Rockefeller University       Laboratory of Nanoscale Biophysics and Biochemistry                                  Machines on Genes: May the Force Be With You   Recommended Readings: Empirical Articles Li, Sai; Zheng, Eric Bo; Zhao, Li; et al. (2019). Nonreciprocal [...]

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Recommended Readings: Alipasha Vaziri, Ph.D. Friday January 31, 2020

By |2020-01-08T21:27:59+00:00January 8th, 2020|Categories: Biophysics, Computational Biology, Neuroscience, Optogenetics|Tags: , , |

Friday Lectures   Friday, January 31, 2020  3:45 p.m Caspary Auditorium Alipasha Vaziri, Ph.D. Associate Professor and Head Laboratory of Neurotechnology and Biophysics The Rockefeller University Towards Whole-brain Dynamic Maps of Neuronal Circuits   Recommended Readings: Science News New Microscopy Technique Measures Activity of Deep Brain Regions. April 16, 2019. Genetic Engineering & Biotechnology News Empirical [...]

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Recommended Readings: Patrick Cramer, Ph.D. Friday January 17, 2020

By |2020-01-02T22:44:17+00:00January 2nd, 2020|Categories: Biophysics, Chemistry, Computational Biology, Friday Lectures, Genomics, Recommended Readings, Structure Biology|Tags: , , , , , , |

Friday Lectures   Friday, January 17, 2020  3:45 p.m Caspary Auditorium Patrick Cramer, Ph.D. Director Department of Molecular Biology Max Planck Institute                                     Mechanisms of Chromatin Transcription   Recommended Readings: Empirical Articles Farnung, Lucas; Vos, Seychelle M.; Cramer, Patrick. (2018). Structure of transcribing RNA polymerase II-nucleosome complex. NATURE COMMUNICATIONS. 9 Boehning, Marc; Dugast-Darzacq, Claire; Rankovic, Marija; [...]

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Recommended Readings: Gina G. Turrigiano, Ph.D. Friday September 20, 2019

By |2019-09-06T20:46:59+00:00September 6th, 2019|Categories: Biology, Biophysics, Computational Biology, Electrophysiology, Friday Lectures, Neuroscience, Recommended Readings|Tags: , , , , |

Friday Lectures Friday, September 20, 2019  3:45 p.m Caspary Auditorium Gina G. Turrigiano Ph.D. Joseph Levitan Professor of Vision Science Department of Biology                                                                 Brandeis University                                         Firing Rate Homeostasis in Neocortical Networks   Recommended Readings: Empirical Articles Miska, Nathaniel J.; Richter, Leonidas M. A.; Cary, Brian A.; et al. (2018). Sensory experience inversely regulates [...]

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Recommended Readings: Li Zhao, Ph.D. Monday April 15, 2019

By |2019-08-02T18:54:22+00:00April 10th, 2019|Categories: Computational Biology, Evolution, Genetics, Genomics, Mathematics/Physics, Monday Lectures, Recommended Readings|Tags: , , , , |

Monday Lectures Monday, April 15, 2019  4:00 p.m. Carson Family Auditorium Li Zhao, Ph.D. Assistant Professor and Head Laboratory of Evolutionary Genetics and Genomics The Rockefeller University The Origin and Evolution of De Novo Genes   Recommended Readings: Empirical Articles Matthews, Benjamin J.; Dudchenko, Olga; Kingan, Sarah B.; et al. (2018). Improved reference genome of [...]

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Recommended Readings: David Baker, Ph.D. Friday January 11, 2019

By |2019-08-02T18:54:23+00:00December 21st, 2018|Categories: Biochemistry, Computational Biology, Evolution, Friday Lectures, Recommended Readings|Tags: , , |

  Friday Lectures Friday, January 11, 2018  3:45 p.m Caspary Auditorium David Baker Ph.D. Professor of Biochemistry and Director of the Institute for Protein Design University of Washington The Coming of Age of De Novo Protein Design Recommended Readings: Science News Scientists program proteins to pair exactly. December 19, 2018. Science Daily Empirical Articles Shen, [...]

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Recommended Readings: Peter Reddien, Ph.D. Friday September 28, 2018

By |2019-08-02T18:54:51+00:00September 21st, 2018|Categories: Cell Biology, Computational Biology, Developmental Biology, Friday Lectures, Genetics, Recommended Readings, Stem Cell Research|Tags: , , , |

Friday Lectures Friday, September 28, 2018  3:45 p.m. Caspary Auditorium Peter Reddien Ph.D. Professor and Associate Department Head Department of Biology Massachusetts Institute of Technology How Stem Cells and Positional Information Lead to Planarian Regeneration Recommended Readings: Science News Lisa Girard. A blueprint for regeneration. March 15, 2018. MIT News Empirical Articles Fincher, Christopher T.; [...]

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Recommended Readings: Erich Jarvis, Ph.D. Friday March 2nd, 2018

By |2019-08-02T18:55:12+00:00February 22nd, 2018|Categories: Computational Biology, Evolution, Friday Lectures, Genetics, Genomics, Neurosciences and Behavior, Organismal Biology|Tags: , , , , , |

Friday Lectures Friday, March 2nd, 2018  3:45 p.m. Caspary Auditorium Erich Jarvis, Ph.D. Professor and Head Laboratory of Neurogenetics of Language The Rockefeller University Insights from non-human animals into the neurobiology of spoken language  Recommended Readings: Science News Jordana Cepelewicz. In Birds’ Songs, Brains and Genes, He Finds Clues to Speech. (2018, Jan 30). Quanta [...]

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