Genomics

Recommended Readings: Agata Smogorzewska, M.D., Ph.D. Monday December 16, 2019

By |2019-12-09T22:23:54+00:00December 9th, 2019|Categories: Cell Biology, Genetics, Genomics, Monday Lectures, Recommended Readings|Tags: , , , , , |

Monday Lectures  Monday, December 16, 2019  4:00 p.m. Carson Family Auditorium Agata Smogorzewska, M.D., Ph.D. Associate Professor and Head Laboratory of Genome Maintenance The Rockefeller University Stress Response at the Replication Fork   Recommended Readings: Empirical Articles Rickman, K.A., Noonan, R., Lach, F.P., Sridhar, S., Wang, A.T., Abhyankar, A., Kelly, M., Auerbach, A.D., and Smogorzewska, [...]

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Recommended Readings: Robert G. Roeder, Ph.D. Monday November 11, 2019

By |2019-10-30T17:53:56+00:00October 30th, 2019|Categories: Biochemistry, Cancer Biology, Cell Biology, Genetics, Genomics, Molecular Biology|Tags: , , |

Monday Lectures Monday, November 11, 2019  4:00 p.m. Carson Family Auditorium Robert G. Roeder, Ph.D. Arnold and Mabel Beckman Professor and Head Laboratory of Biochemistry and Molecular Biology The Rockefeller University   50+ years of eukaryotic transcription: an expanding universe of factors and mechanisms   Recommended Readings: Empirical Articles Zhang D, Tang Z, Huang H, [...]

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Recommended Readings: Carol A. Gross, Ph.D. Friday November 8, 2019

By |2019-10-28T15:10:53+00:00October 28th, 2019|Categories: Cell and Tissue Biology, Friday Lectures, Genomics, Immunology, Microbiology, Recommended Readings|Tags: , , , , |

  Friday Lectures   Friday, November 8, 2019  3:45 p.m Caspary Auditorium Carol A. Gross, Ph.D. Professor Department of Cell and Tissue Biology University of California New Insights into the Transcriptional Organization and Cellular Economy of Bacteria   Recommended Readings: Empirical Articles Peters, Jason M.; Koo, Byoung-Mo; Patino, Ramiro; et al. (2019). Enabling genetic analysis of [...]

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Recommended Readings: Viviana Risca, Ph.D. Monday November 4, 2019

By |2019-10-22T17:52:39+00:00October 22nd, 2019|Categories: Cancer Biology, Cell Biology, Genetics, Genomics, Monday Lectures, Recommended Readings|Tags: , , , |

Monday Lectures Monday, November 4, 2019  4:00 p.m. Carson Family Auditorium Viviana Risca, Ph.D. Assistant Professor and Head Laboratory of Genome Architecture and Dynamics The Rockefeller University Probing Meso-Scale Chromatin Structure and Accessibility   Recommended Readings: Empirical Articles Risca, Viviana I. (2019). Nucleosome Orientation Map Finds Two New Chromatin Folding Motifs. CELL. 176 (3): 412-413 [...]

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Recommended Readings: Z. Jeffrey Chen, Ph.D. Friday October 25, 2019

By |2019-10-16T18:17:05+00:00October 16th, 2019|Categories: Epigenetics, Friday Lectures, Genomics, Integrative Biology, Molecular Biology, Recommended Readings|Tags: , , , , |

                                                                         Friday Lectures   Friday, October 25, 2019  3:45 p.m Caspary Auditorium   Z. Jeffrey Chen, Ph.D. D. J. Sibley Centennial Professor in Plant Molecular Genetics Department of Molecular Biosciences University of Texas Circadian and Epigenetic Regulation of Hybrid Vigor     Recommended Readings: Empirical Articles Kirkbride, Ryan C.; Lu, Jie; Zhang, Changqing; et al. (2019). [...]

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Recommended Readings: Kivanç Birsoy, Ph.D. Monday May 20, 2019

By |2019-08-02T18:53:12+00:00May 15th, 2019|Categories: Cancer Biology, Cell Biology, Friday Lectures, Genetics, Genomics, Mechanisms of Human Disease, Recommended Readings|Tags: , , , |

Monday Lectures Monday, May 20, 2019  4:00 p.m. Carson Family Auditorium Kivanç Birsoy, Ph.D. Chapman Perelman Assistant Professor and Head Laboratory of Metabolic Regulation and Genetics The Rockefeller University Metabolic Limitations of Cancer Cell Proliferation    Recommended Readings: Science News Oxygen-Starved Cancer Cells Languish without Aspartate. Jun 25, 2018. Genetic Engineering & Biotechnology News Empirical [...]

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Recommended Readings: Beth Shapiro, D.Phil, Friday May 3, 2019

By |2019-08-02T18:53:12+00:00April 25th, 2019|Categories: Ecology, Evolutionary Biology, Friday Lectures, Genomics, Recommended Readings|Tags: , , , , |

Friday Lectures Friday, May 3, 2019  3:45 p.m Caspary Auditorium Beth Shapiro D.Phil Professor Department of Ecology and Evolutionary Biology University of California Can Ancient DNA Reveal What Makes Us Human? Recommended Readings: Science News How to Clone a Mammoth: The Science of De-extinction. April 23, 2019. Technology Networks Empirical Articles Fregel, Rosa; Ordonez, Alejandra [...]

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Recommended Readings: Coleen Murphy, Ph.D. Friday April 26, 2019

By |2019-08-02T18:54:22+00:00April 22nd, 2019|Categories: Friday Lectures, Genetics, Genomics, Molecular Biology, Recommended Readings|Tags: , |

Friday Lectures Friday, April 26, 2019  3:45 p.m Caspary Auditorium Coleen Murphy Ph.D.  Professor and Director Glenn Center for Quantitative Aging Research                                                           Princeton University Transgenerational Inheritance of Pathogen Avoidance (or, How Getting Food Sickness Might Save Your Species)   Recommended Readings: Science News Paternal transmission of epigenetic memory via sperm. October 17, 2018. Science [...]

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Recommended Readings: Li Zhao, Ph.D. Monday April 15, 2019

By |2019-08-02T18:54:22+00:00April 10th, 2019|Categories: Computational Biology, Evolution, Genetics, Genomics, Mathematics/Physics, Monday Lectures, Recommended Readings|Tags: , , , , |

Monday Lectures Monday, April 15, 2019  4:00 p.m. Carson Family Auditorium Li Zhao, Ph.D. Assistant Professor and Head Laboratory of Evolutionary Genetics and Genomics The Rockefeller University The Origin and Evolution of De Novo Genes   Recommended Readings: Empirical Articles Matthews, Benjamin J.; Dudchenko, Olga; Kingan, Sarah B.; et al. (2018). Improved reference genome of [...]

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BioCyc database collection

By |2019-08-02T18:54:23+00:00December 19th, 2018|Categories: Database, Genomics|

The BioCyc collection of Pathway/Genome Databases (PGDBs) provides a reference on the genomes and metabolic pathways of thousands of sequenced organisms. BioCyc PGDBs are generated by software that predict the metabolic pathways of completely sequenced organisms, predict which genes code for missing enzymes in metabolic pathways, and predict operons. BioCyc also integrates information from other [...]

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