Recommended Readings: Wade Harper, Ph.D. Friday January 15, 2021

Recommended Readings: Wade Harper, Ph.D. Friday January 15, 2021

Webinar Friday Lecture SeriesWade Harper, Ph.D.

(open to the Tri-I community)

Friday, January 15, 2021

Wade Harper, Ph.D.

Bert and Natalie Vallee Professor of Molecular Pathology and Chair

Department of Cell Biology

Harvard Medical School

Understanding Selective Organelle Remodeling by Autophagy

 

Recommended Readings:

Empirical Articles

Ordureau, Alban; Paulo, Joao A.; Zhang, Jiuchun; et al. (2020). Global Landscape and Dynamics of Parkin and USP30-Dependent Ubiquitylomes in iNeurons during Mitophagic Signaling. MOLECULAR CELL. 77 (5): 1124-1142

McKenna, Michael J.; Sim, Sue Im; Ordureau, Alban; et al. (2020). The endoplasmic reticulum P5A-ATPase is a transmembrane helix dislocase. Science. 369 (6511): 1583-+

An, Heeseon; Ordureau, Alban; Koerner, Maria; et al. (2020). Systematic quantitative analysis of ribosome inventory during nutrient stress. NATURE. 583 (7815): 303-309

Ordureau, Alban; Paulo, Joao A.; Zhang, Wei; et al. (2018). Dynamics of PARKIN-Dependent Mitochondrial Ubiquitylation in Induced Neurons and Model Systems Revealed by Digital Snapshot Proteomics. MOLECULAR CELL. 70 (2): 211-

Ordureau, Alban; Heo, Jin-Mi; Duda, David M.; et al. (2015). Defining roles of PARKIN and ubiquitin phosphorylation by PINK1 in mitochondrial quality control using a ubiquitin replacement strategy. PNAS. 112 (21): 6637-6642

Ordureau, Alban; Sarraf, Shireen A.; Duda, David M.; et al. (2014). Quantitative Proteomics Reveal a Feedforward Mechanism for Mitochondrial PARKIN Translocation and Ubiquitin Chain Synthesis. MOLECULAR CELL. 56 (3): 360-375

Sarraf, Shireen A.; Raman, Malavika; Guarani-Pereira, Virginia; et al. (2013). Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization. NATURE. 496 (7445): 372-376

Review Papers

An, Heeseon; Harper, J. Wade. (2020). Ribosome Abundance Control Via the Ubiquitin-Proteasome System and Autophagy. JOURNAL OF MOLECULAR BIOLOGY. 432 (1)

Harper, J. Wade; Ordureau, Alban; Heo, Jin-Mi. (2018). Building and decoding ubiquitin chains for mitophagy. NATURE REVIEWS MOLECULAR CELL BIOLOGY. 19 (2): 93-108

Galluzzi, Lorenzo; Baehrecke, Eric H.; Ballabio, Andrea; et al. (2017). Molecular definitions of autophagy and related processes. EMBO JOURNAL. 36 (13): 1811-1836

Klionsky, Daniel J.; Abdelmohsen, Kotb; Abe, Akihisa; et al. (2016). Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). AUTOPHAGY. 12 (1): 1-222

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About the Author:

Ilaria Ceglia, Ph.D., Science Informationist - Ilaria joined the Markus Library Team in 2017. As science liaison between the Rockefeller scientific community and the library, Ilaria assists Rockefeller scientists find, and effectively use, the scholarly communication tools available at the library, provides customized literature searching, delivers research information reports and publications metric analysis to enhance collaborations between Rockefeller and leading scientific institutions, provides access to digital content to manage large data freely accessible. Ilaria manages a drug development database to perform clinical literature searches and drugs pipeline reports for Rockefeller research faculty, scientists and clinicians. As the NIH compliance monitor for the Rockefeller University, Ilaria helps faculty to solve scientific submission requirements issues and ensures Rockefeller remains compliant with NIH Public Access Policy. Her role also includes evaluate and select new databases to complement other resource center services, organize tutorial training sessions in areas of life sciences and on the use of reference management platforms F1000 Workspace, Scopus, Web of Science and PubMed literature searching, managing recommendation readings library blog for lectures and special seminars. Ilaria is a neuroscientist and a former Rockefeller postdoctoral and research associate of Dr. Paul Greengard’s laboratory. She was a Research Assistant Professor at the Icahn School of Medicine at Mount Sinai, New York and an Adjunct Assistant Professor at City College and Hunter College in New York, where she taught Cell Biology and Biochemistry. As an Italian expat living in New York, Ilaria is an enthusiastic proponent of Italian culture among friends and colleagues.