Recommended Readings: David Kingsley, Ph.D. April 18

Friday Lecture Series
Friday, April 18, 2014
3:45 p.m., Caspary Auditorium

David Kingsley, Ph.D.
HHMI and Department of Developmental Biology
Stanford University School of Medicine

Fishing for the secrets of vertebrate evolution

Recommended Readings:

Empirical Papers

Chan, Y. F., Marks, M. E., Jones, F. C., Villarreal, G., Shapiro, M. D., Brady, S. D., … Kingsley, D. M. (2010). Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer. Science, 327(5963), 302–305. doi:10.1126/science.1182213

Colosimo, P. F., Hosemann, K. E., Balabhadra, S., Villarreal, G., Dickson, M., Grimwood, J., … Kingsley, D. M. (2005). Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles. Science, 307(5717), 1928–1933. doi:10.1126/science.1107239

Jones, F. C., Grabherr, M. G., Chan, Y. F., Russell, P., Mauceli, E., Johnson, J., … Kingsley, D. M. (2012). The genomic basis of adaptive evolution in threespine sticklebacks. Nature, 484(7392), 55–61. doi:10.1038/nature10944

Miller, C. T., Beleza, S., Pollen, A. a, Schluter, D., Kittles, R. a, Shriver, M. D., & Kingsley, D. M. (2007). cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans. Cell, 131(6), 1179–1189. doi:10.1016/j.cell.2007.10.055

Shapiro, M. D., Marks, M. E., Peichel, C. L., Blackman, B. K., Nereng, K. S., Jónsson, B., … Kingsley, D. M. (2004). Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks. Nature, 428(6984), 717–723. doi:10.1038/nature02415

Review Articles

McKinnon, J. S., & Rundle, H. D. (2002). Speciation in nature: the threespine stickleback model systems. Trends in Ecology & Evolution, 17(10), 480–488. doi:10.1016/S0169-5347(02)02579-X

Recommended Readings: Leslie M Turner PhD Oct 22, 2012

Genomic Networks of Hybrid Sterility

Leslie M Turner  PhD

Postdoctoral Fellow

Laboratory of Genetics, University of Wisconsin – Madison

Monday, October 22,  2012

4 p.m. , Caspary Auditorium.   Refreshments 3:45 p.m.

Recommended Readings:

Janousek, V; Wang, LY; Luzynski, K; et al.  2012.  Genome-wide architecture of reproductive isolation in naturally occurring hybrid zone between Mus musculus musculus and M. m. domesticus.   Molecular Ecology.  21(12):3032-3047.  DOI:10.111/j.1365-294X.2012.05583.x

White, MA; Steffy, B; Wiltshire, T; et al.  2011.  Genetic dissection of a key reproductive barrier between nascent species of house mice.  Genetics. 189(1):289-U988.  DOI:10.1534/genetics.111.129171

Turner, LM; Schwahn, DJ; Harr, B.  2012.  Reduced male fertility is common but highly variable in form and severity in a natural house mouse hybrid zone.   Evolution.  66(2):443-458 DOI:10.1111/j.1558-5646.2011.01445.x

Turner, LM; Young, AR; Roempler, H; et al.  2010.  Monogamy evolves through multiple mechanisms: evidence from V1aR in deer mice.  Molecular Biology and Evolution.  27(6)1269-1278.  DOI:10.1093/molbev/msq013

Harr, B; Turner, LM.  2010.  Genome-wide analysis of alternative splicing evolution among Mus subspecies.  Molecular Ecology.  19(suppl 1):228-239.  DOI:10.1111/j.1365-294X.04490.x

Gompert, Z; Buerkle, CA.  2009.  A powerful regression-based method for admixture mapping of isolation across the genome of hybrids.  Molecular Ecology.  18(6):1207-1224.  DOI:10.1111/j.1365-0294X.04098.x

Elliott, RW; Miller, DR; Pearsall, RS; et al.  2001.  Genetic analysis of testis weight and fertility in an interspecies hybrid congenic strain for chromosome X.   Mammalian Genome.  12(1):45-51.  DOI:10.1007/s003350010234

Recommended Readings: Marcus Kronforst Ph.D. March 15, 2010

Monday Lecture Series

Exploring the Evolution and Genetics of Adaptation and

Speciation in Tropical Butterflies

Marcus Kronforst, Ph.D.,

Bauer Fellow, FAS Center for Systems Biology

Harvard University

March 15, 2010

Welch Hall,  Level Two

4:00 p.m.-5:00 p.m

Recommended Readings:

Chamberlain NL, Hill RI, Kapan DD, et al.  2009.  Polymorphic Butterfly Reveals the Missing Link in Ecological Speciation. SCIENCE   326(5954):847-850

Wheat CW, Watt WB.  2008.  A mitochondrial-DNA-based phylogeny for some evolutionary-genetic model species of Colias butterflies (Lepidoptera, Pieridae) . MOLECULAR PHYLOGENETICS AND EVOLUTION    47(3):893-902

Salazar C, Jiggins CD, Taylor JE, et al.  2008.  Gene flow and the genealogical history of Heliconius heurippa . BMC EVOLUTIONARY BIOLOGY    8:Article Number  132

Allen CE, Beldade P, Zwaan BJ, et al.  2008.  Differences in the selection response of serially repeated color pattern characters: Standing variation, development, and evolution. BMC EVOLUTIONARY BIOLOGY    8:Article Number  94

Kronforst MR .   2008.  Gene flow persists millions of years after speciation in Heliconius butterflies. BMC EVOLUTIONARY BIOLOGY   8 :Article Number 98

Kronforst MR, Gilbert LE.  2008.  The population genetics of mimetic diversity in Heliconius butterflies. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES    275(1634):493-500

Frentiu FD, Bernard GD, Sison-Mangus MP, et al.  2007.   Gene duplication is an evolutionary mechanism for expanding spectral diversity in the long-wavelength photopigments of butterflies. MOLECULAR BIOLOGY AND EVOLUTION    24(9):2016-2028

Kronforst MR, Young LG, Gilbert LE.   2007.  Reinforcement of mate preference among hybridizing Heliconius butterflies.    JOURNAL OF EVOLUTIONARY BIOLOGY   20(1):278-285

Kronforst MR, Kapan DD, Gilbert LE.   2006.  Parallel genetic architecture of parallel adaptive radiations in mimetic heliconius butterflies. GENETICS   174(1):535-539

Parchem RJ, Perry MW, Patel NH.   2007.  Patterns on the insect wing. CURRENT OPINION IN GENETICS & DEVELOPMENT    17(4):300-308