Monday Lecture Series
Visualizing Transcription at Nucleotide Resolution Using Nascent Transcript Sequencing
Lee Stirling Churchman, Ph.D.
Post Doctoral Researcher, Department of Cellular and Molecular Pharmacology
University of California, San Francisco
April 4, 2011
4:00 – 5:00 p.m. Caspary Auditorium
Churchman, LS; Weissman, JS. 2011. Nascent transcript sequencing visualizes transcription at nucleotide resolution. NATURE. 469(7330):368-
Namekawa, SH; Lee, JT. 2011. Detection of nascent RNA, single-copy DNA and protein localization by immunoFISH in mouse germ cells and preimplantation embryos. NATURE Protocols. 6(3): 10.1038/nprot.2010.195
Mortenson, KI; Churchman, LS; Spudich, JA, et al. 2010. Optimized localization analysis for single-molecule tracking and super-resolution microscopy. NATURE Methods. 7(5):377-U59.
Ingolia, NT; Chaemmaghami, S; Newman, JRS; and Weissman, JS. 2009. Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. SCIENCE. 324(5924):218-223.
Churchman, LS; Okten, Z; Rock, RS et al. 2005. Single molecule high-resolution colocalization of Cy3 and Cy5 attached to macromolecules measures intramolecular distances through time. PNAS 102(5):1419-1423.
Okten, Z; Churchman, LS; Rock, RS et al. 2004. Myosin VI walks hand-over-hand along actin. NATURE Structural & Molecular Biology. 11(9):884-887.